Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1543

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1543
Name
Replicon chromosome
Genomic location 1877969 - 1878709 (- strand)

Cross-References

RefSeq YP_004352744.1
GI 330808282
Entrez 10470458
INSDC AEA67740.1
NCBI Locus Tag PSEBR_a1543
UniParc UPI0002041370
UniProtKB Acc F2KEA4
UniProtKB ID F2KEA4_PSEBN
UniRef100 UniRef100_F2KEA4
UniRef50 UniRef50_Q2C3S0
UniRef90 UniRef90_A0A0B7DBY0

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -5.57
Kyte-Doolittle Hydrophobicity Value -0.022
Molecular Weight (kDa) 26.3
Isoelectric Point (pI) 5.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 642 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002442 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1543

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 14 [Source:HGNC Symbol;Acc:HGNC:23238]
E-value: 5.6e-12
Percent Identity: 29.0

References

No references are associated with this feature.