Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1560

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1560
Name
Replicon chromosome
Genomic location 1901739 - 1903106 (+ strand)

Cross-References

RefSeq YP_004352764.1
GI 330808302
Entrez 10470478
INSDC AEA67760.1
NCBI Locus Tag PSEBR_a1560
UniParc UPI00020414C5
UniProtKB Acc F2KEC4
UniProtKB ID F2KEC4_PSEBN
UniRef100 UniRef100_F2KEC4
UniRef50 UniRef50_F2KEC4
UniRef90 UniRef90_F2KEC4

Product

Feature Type CDS
Coding Frame 1
Product Name
polysaccharide biosynthesis protein
Synonyms
Evidence for Translation
Charge (pH 7) 10.64
Kyte-Doolittle Hydrophobicity Value 0.795
Molecular Weight (kDa) 49.4
Isoelectric Point (pI) 9.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 76 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG028758 (5 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1560

Human Homologs

References

No references are associated with this feature.