Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1600

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1600
Name
Replicon chromosome
Genomic location 1947870 - 1948304 (+ strand)

Cross-References

RefSeq YP_004352805.1
GI 330808343
Entrez 10470519
INSDC AEA67801.1
NCBI Locus Tag PSEBR_a1600
UniParc UPI0002041634
UniProtKB Acc F2K996
UniProtKB ID F2K996_PSEBN
UniRef100 UniRef100_A0A0D0T4T3
UniRef50 UniRef50_G8Q1V4
UniRef90 UniRef90_G8Q1V4

Product

Feature Type CDS
Coding Frame 1
Product Name
membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.46
Kyte-Doolittle Hydrophobicity Value 1.030
Molecular Weight (kDa) 14.7
Isoelectric Point (pI) 9.58

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 153 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002705 (481 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1600
Search term: membrane protein

Human Homologs

References

No references are associated with this feature.