Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1747

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1747
Name
Replicon chromosome
Genomic location 2138032 - 2140179 (+ strand)

Cross-References

RefSeq YP_004352961.1
GI 330808499
Entrez 10470675
INSDC AEA67957.1
NCBI Locus Tag PSEBR_a1747
UniParc UPI0002041B7C
UniProtKB Acc F2K9H2
UniProtKB ID F2K9H2_PSEBN
UniRef100 UniRef100_A0A0D0T5D2
UniRef50 UniRef50_P28793
UniRef90 UniRef90_Q4KFC4

Product

Feature Type CDS
Coding Frame 1
Product Name
multifunctional fatty acid oxidation complex
Synonyms
Evidence for Translation
Charge (pH 7) -6.15
Kyte-Doolittle Hydrophobicity Value -0.015
Molecular Weight (kDa) 77.4
Isoelectric Point (pI) 5.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1WDM LYASE,OXIDOREDUCTASE/TRANSFERASE 05/17/04 fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form I (native3) Pseudomonas fragi 3.8 X-RAY DIFFRACTION 93.4
1WDK LYASE,OXIDOREDUCTASE/TRANSFERASE 05/17/04 fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form I (native2) Pseudomonas fragi 2.5 X-RAY DIFFRACTION 93.4
1WDL LYASE,OXIDOREDUCTASE/TRANSFERASE 05/17/04 fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form II (native4) Pseudomonas fragi 3.5 X-RAY DIFFRACTION 93.4
2D3T LYASE, OXIDOREDUCTASE/TRANSFERASE 10/01/05 Fatty Acid beta-oxidation multienzyme complex from Pseudomonas Fragi, Form V Pseudomonas fragi 3.4 X-RAY DIFFRACTION 93.4

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 487 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002568 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1747

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha [Source:HGNC Symbol;Acc:HGNC:4801]
E-value: 1.5e-97
Percent Identity: 32.9

References

No references are associated with this feature.