Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1767

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a1767
Name
Replicon	chromosome
Genomic location	2167733 - 2168431 (+ strand)

Cross-References

RefSeq	YP_004352982.1
GI	330808520
Entrez	10470696
INSDC	AEA67978.1
NCBI Locus Tag	PSEBR_a1767
UniParc	UPI0002041CD9
UniProtKB Acc	F2K9J3
UniProtKB ID	F2K9J3_PSEBN
UniRef100	UniRef100_A0A0D0TDN8
UniRef50	UniRef50_Q4KFA2
UniRef90	UniRef90_Q4KFA2

Product

Feature Type	CDS
Coding Frame	1
Product Name	liporotein ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-2.17
Kyte-Doolittle Hydrophobicity Value	-0.045
Molecular Weight (kDa)	25.1
Isoelectric Point (pI)	6.51

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002595 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a1767 Search term: liporotein ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000413080 transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43] E-value: 4.0e-20 Percent Identity: 30.8
Ensembl 110, assembly GRCh38.p14	ENSP00000405356 transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43] E-value: 4.0e-20 Percent Identity: 30.8
Ensembl 110, assembly GRCh38.p14	ENSP00000412933 transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43] E-value: 4.0e-20 Percent Identity: 30.8
Ensembl 110, assembly GRCh38.p14	ENSP00000372722 transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43] E-value: 4.0e-20 Percent Identity: 30.8
Ensembl 110, assembly GRCh38.p14	ENSP00000415660 transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43] E-value: 4.0e-20 Percent Identity: 30.8
Ensembl 110, assembly GRCh38.p14	ENSP00000401149 transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43] E-value: 4.0e-20 Percent Identity: 30.8
Ensembl 110, assembly GRCh38.p14	ENSP00000346206 transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43] E-value: 4.0e-20 Percent Identity: 30.8
Ensembl 110, assembly GRCh38.p14	ENSP00000513712 transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43] E-value: 4.0e-20 Percent Identity: 30.8
Ensembl 110, assembly GRCh38.p14	ENSP00000402316 transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43] E-value: 4.0e-20 Percent Identity: 30.8

References