Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3367

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a3367
Name
Replicon chromosome
Genomic location 4160006 - 4161445 (+ strand)

Cross-References

RefSeq YP_004354692.1
GI 330810230
Entrez 10472413
INSDC AEA69688.1
NCBI Locus Tag PSEBR_a3367
UniParc UPI0002040A10
UniProtKB Acc F2KI92
UniProtKB ID F2KI92_PSEBN
UniRef100 UniRef100_A0A0D0SU33
UniRef50 UniRef50_Q59699
UniRef90 UniRef90_G8QBC4

Product

Feature Type CDS
Coding Frame 1
Product Name
dihydropyrimidinase
Synonyms
Evidence for Translation
Charge (pH 7) -10.33
Kyte-Doolittle Hydrophobicity Value -0.242
Molecular Weight (kDa) 52.4
Isoelectric Point (pI) 6.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 566 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000432 (845 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a3367

Human Homologs

Ensembl 97, assembly GRCh38.p12
dihydropyrimidinase [Source:HGNC Symbol;Acc:HGNC:3013]
E-value: 5.6e-142
Percent Identity: 53.1

References

No references are associated with this feature.