Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3382

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a3382
Name
Replicon	chromosome
Genomic location	4179475 - 4180494 (+ strand)

Cross-References

RefSeq	YP_004354708.1
GI	330810246
Entrez	10472429
INSDC	AEA69704.1
NCBI Locus Tag	PSEBR_a3382
UniParc	UPI0002040A20
UniProtKB Acc	F2KIA8
UniProtKB ID	F2KIA8_PSEBN
UniRef100	UniRef100_A0A0D0RYH0
UniRef50	UniRef50_O26004
UniRef90	UniRef90_Q4KDP6

Product

Feature Type	CDS
Coding Frame	1
Product Name	branched-chain-amino-acid transaminase
Synonyms
Evidence for Translation
Charge (pH 7)	-0.05
Kyte-Doolittle Hydrophobicity Value	-0.126
Molecular Weight (kDa)	37.0
Isoelectric Point (pI)	6.99

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
6JIF	TRANSFERASE	02/21/19	Crystal Structures of Branched-Chain Aminotransferase from Pseudomonas sp. UW4	Pseudomonas sp. UW4	1.7	X-RAY DIFFRACTION	92.3

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 527 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG016356 (175 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a3382 Search term: branched-chain-amino-acid transaminase

Human Homologs

References