Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3460

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a3460
Name
Replicon chromosome
Genomic location 4266110 - 4266886 (- strand)

Cross-References

RefSeq YP_004354793.1
GI 330810331
Entrez 10472514
INSDC AEA69789.1
NCBI Locus Tag PSEBR_a3460
UniParc UPI0002040E38
UniProtKB Acc F2K7W8
UniProtKB ID F2K7W8_PSEBN
UniRef100 UniRef100_A0A0D0SY51
UniRef50 UniRef50_Q92YJ2
UniRef90 UniRef90_A0A0B7D961

Product

Feature Type CDS
Coding Frame 1
Product Name
dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -0.55
Kyte-Doolittle Hydrophobicity Value 0.260
Molecular Weight (kDa) 26.8
Isoelectric Point (pI) 6.55

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 650 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG029145 (55 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a3460
Search term: dehydrogenase

Human Homologs

Ensembl 110, assembly GRCh38.p14
dicarbonyl and L-xylulose reductase [Source:HGNC Symbol;Acc:HGNC:18985]
E-value: 3.0e-16
Percent Identity: 29.3

References

No references are associated with this feature.