Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3585

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a3585
Name
Replicon chromosome
Genomic location 4401688 - 4403043 (+ strand)

Cross-References

RefSeq YP_004354929.1
GI 330810467
Entrez 10472650
INSDC AEA69925.1
NCBI Locus Tag PSEBR_a3585
UniParc UPI00000B4536
UniProtKB Acc F2KIP9
UniProtKB ID F2KIP9_PSEBN
UniRef100 UniRef100_Q9KGW4
UniRef50 UniRef50_P31979
UniRef90 UniRef90_Q4K9T2

Product

Feature Type CDS
Coding Frame 1
Product Name
NADH-quinone oxidoreductase subunit F
Synonyms
Evidence for Translation
Charge (pH 7) -1.82
Kyte-Doolittle Hydrophobicity Value -0.161
Molecular Weight (kDa) 48.8
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 456 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002153 (868 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a3585

Human Homologs

Ensembl 110, assembly GRCh38.p14
NADH:ubiquinone oxidoreductase core subunit V1 [Source:HGNC Symbol;Acc:HGNC:7716]
E-value: 2.0e-84
Percent Identity: 43.4
Ensembl 110, assembly GRCh38.p14
NADH:ubiquinone oxidoreductase core subunit V1 [Source:HGNC Symbol;Acc:HGNC:7716]
E-value: 2.0e-84
Percent Identity: 43.4
Ensembl 110, assembly GRCh38.p14
NADH:ubiquinone oxidoreductase core subunit V1 [Source:HGNC Symbol;Acc:HGNC:7716]
E-value: 2.0e-84
Percent Identity: 43.4
Ensembl 110, assembly GRCh38.p14
NADH:ubiquinone oxidoreductase core subunit V1 [Source:HGNC Symbol;Acc:HGNC:7716]
E-value: 2.0e-84
Percent Identity: 43.4

References

No references are associated with this feature.