Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3710

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a3710
Name
Replicon chromosome
Genomic location 4554022 - 4555575 (- strand)

Cross-References

RefSeq YP_004355066.1
GI 330810604
Entrez 10472788
INSDC AEA70062.1
NCBI Locus Tag PSEBR_a3710
UniParc UPI0002041811
UniProtKB Acc F2KJ36
UniProtKB ID F2KJ36_PSEBN
UniRef100 UniRef100_F2KJ36
UniRef50 UniRef50_D7HZ02
UniRef90 UniRef90_Q4KEX3

Product

Feature Type CDS
Coding Frame 1
Product Name
ribose ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -13.68
Kyte-Doolittle Hydrophobicity Value 0.080
Molecular Weight (kDa) 55606.3
Isoelectric Point (pI) 4.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000134 (908 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a3710

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
E-value: 1.3e-10
Percent Identity: 25.1
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
E-value: 1.3e-10
Percent Identity: 25.1

References

No references are associated with this feature.