Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3908

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a3908
Name
Replicon chromosome
Genomic location 4776896 - 4778044 (+ strand)

Cross-References

RefSeq YP_004355302.1
GI 330810840
Entrez 10473033
INSDC AEA70298.1
NCBI Locus Tag PSEBR_a3908
UniParc UPI0002040A2D
UniProtKB Acc F2KJS2
UniProtKB ID F2KJS2_PSEBN
UniRef100 UniRef100_F2KJS2
UniRef50 UniRef50_Q4K9A5
UniRef90 UniRef90_G8Q472

Product

Feature Type CDS
Coding Frame 1
Product Name
Macrolide-specific efflux protein
Synonyms
Evidence for Translation
Charge (pH 7) 3.73
Kyte-Doolittle Hydrophobicity Value -0.293
Molecular Weight (kDa) 41.2
Isoelectric Point (pI) 9.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 466 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003138 (479 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a3908

Human Homologs

References

No references are associated with this feature.