Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3939
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest |
| Locus Tag |
PSEBR_a3939
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4849288 - 4849884 (+ strand) |
Cross-References
| RefSeq | YP_004355337.1 |
| GI | 330810875 |
| Entrez | 10473073 |
| NCBI Locus Tag | PSEBR_a3939 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
short chain dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.68 |
| Kyte-Doolittle Hydrophobicity Value | -0.202 |
| Molecular Weight (kDa) | 22085.8 |
| Isoelectric Point (pI) | 5.61 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 583 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000115 (445 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSEBR_a3939
Search term: short chain dehydrogenase
|
Human Homologs
References
No references are associated with this feature.