Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3993

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a3993
Name
Replicon chromosome
Genomic location 4902197 - 4903153 (- strand)

Cross-References

RefSeq YP_004355395.1
GI 330810933
Entrez 10473131
INSDC AEA70391.1
NCBI Locus Tag PSEBR_a3993
UniParc UPI0002040E61
UniProtKB Acc F2KK15
UniProtKB ID F2KK15_PSEBN
UniRef100 UniRef100_F2KK15
UniRef50 UniRef50_A9AR82
UniRef90 UniRef90_W6V430

Product

Feature Type CDS
Coding Frame 1
Product Name
2-hydroxyacid dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -3.65
Kyte-Doolittle Hydrophobicity Value 0.214
Molecular Weight (kDa) 33530.3
Isoelectric Point (pI) 5.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 637 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015431 (59 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a3993

Human Homologs

Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2495]
E-value: 5.1e-10
Percent Identity: 26.8
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2495]
E-value: 5.1e-10
Percent Identity: 26.8
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2495]
E-value: 5.1e-10
Percent Identity: 26.8
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2495]
E-value: 5.1e-10
Percent Identity: 26.8
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2495]
E-value: 5.1e-10
Percent Identity: 26.8
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2495]
E-value: 5.1e-10
Percent Identity: 26.8

References

No references are associated with this feature.