Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a4420

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a4420
Name
Replicon chromosome
Genomic location 5364615 - 5367464 (+ strand)

Cross-References

RefSeq YP_004355833.1
GI 330811371
Entrez 10473582
INSDC AEA70829.1
NCBI Locus Tag PSEBR_a4420
UniParc UPI0002041DA0
UniProtKB Acc F2KKU7
UniProtKB ID F2KKU7_PSEBN
UniRef100 UniRef100_F2KKU7
UniRef50 UniRef50_P23378
UniRef90 UniRef90_Q4K7Q8

Product

Feature Type CDS
Coding Frame 1
Product Name
glycine dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -16.98
Kyte-Doolittle Hydrophobicity Value -0.065
Molecular Weight (kDa) 102.5
Isoelectric Point (pI) 6.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 474 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003093 (925 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a4420

Human Homologs

Ensembl 110, assembly GRCh38.p14
glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
E-value: 8.0e-309
Percent Identity: 55.0

References

No references are associated with this feature.