Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a4450

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a4450
Name
Replicon chromosome
Genomic location 5395751 - 5397034 (+ strand)

Cross-References

RefSeq YP_004355865.1
GI 330811403
Entrez 10473615
INSDC AEA70861.1
NCBI Locus Tag PSEBR_a4450
UniParc UPI0002041EF6
UniProtKB Acc F2K506
UniProtKB ID F2K506_PSEBN
UniRef100 UniRef100_A0A0D0SS50
UniRef50 UniRef50_Q4K7C9
UniRef90 UniRef90_A0A0D0SS50

Product

Feature Type CDS
Coding Frame 1
Product Name
OprD family outer membrane porin
Synonyms
Evidence for Translation
Charge (pH 7) -10.31
Kyte-Doolittle Hydrophobicity Value -0.448
Molecular Weight (kDa) 46.4
Isoelectric Point (pI) 4.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 24 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000187 (1579 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a4450

Human Homologs

References

No references are associated with this feature.