Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a4896

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a4896
Name
Replicon chromosome
Genomic location 5930055 - 5931062 (- strand)

Cross-References

RefSeq YP_004356321.1
GI 330811859
Entrez 10474082
INSDC AEA71317.1
NCBI Locus Tag PSEBR_a4896
UniParc UPI0002041B03
UniProtKB Acc F2KLK3
UniProtKB ID F2KLK3_PSEBN
UniRef100 UniRef100_A0A0D0R1N2
UniRef50 UniRef50_G8PWZ4
UniRef90 UniRef90_G8PWZ4

Product

Feature Type CDS
Coding Frame 1
Product Name
transmembrane cytochrome oxidase subunit II
Synonyms
Evidence for Translation
Charge (pH 7) -0.87
Kyte-Doolittle Hydrophobicity Value 0.832
Molecular Weight (kDa) 37.3
Isoelectric Point (pI) 6.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 401 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001746 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a4896

Human Homologs

References

No references are associated with this feature.