Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a4940

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a4940
Name
Replicon chromosome
Genomic location 5979835 - 5980461 (+ strand)

Cross-References

RefSeq YP_004356366.1
GI 330811904
Entrez 10474127
INSDC AEA71362.1
NCBI Locus Tag PSEBR_a4940
UniParc UPI0002041DA9
UniProtKB Acc F2K5S3
UniProtKB ID F2K5S3_PSEBN
UniRef100 UniRef100_F2K5S3
UniRef50 UniRef50_B3PL69
UniRef90 UniRef90_F2K5S3

Product

Feature Type CDS
Coding Frame 1
Product Name
Thiamine-phosphate diphosphorylase
Synonyms
Evidence for Translation
Charge (pH 7) 0.58
Kyte-Doolittle Hydrophobicity Value 0.105
Molecular Weight (kDa) 22120.1
Isoelectric Point (pI) 7.20

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 543 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001705 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a4940

Human Homologs

References

No references are associated with this feature.