Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a4978

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a4978
Name
Replicon chromosome
Genomic location 6017631 - 6018263 (- strand)

Cross-References

RefSeq YP_004356406.1
GI 330811944
Entrez 10474167
INSDC AEA71402.1
NCBI Locus Tag PSEBR_a4978
UniParc UPI0002041F0B
UniProtKB Acc F2KLK9
UniProtKB ID F2KLK9_PSEBN
UniRef100 UniRef100_A0A0D0R2P3
UniRef50 UniRef50_Q4K5E9
UniRef90 UniRef90_Q4K5E9

Product

Feature Type CDS
Coding Frame 1
Product Name
decarboxylase
Synonyms
Evidence for Translation
Charge (pH 7) -4.66
Kyte-Doolittle Hydrophobicity Value 0.053
Molecular Weight (kDa) 22.8
Isoelectric Point (pI) 5.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 371 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001664 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a4978
Search term: decarboxylase

Human Homologs

References

No references are associated with this feature.