Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a4979

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a4979
Name
Replicon chromosome
Genomic location 6018260 - 6019609 (- strand)

Cross-References

RefSeq YP_004356407.1
GI 330811945
Entrez 10474168
INSDC AEA71403.1
NCBI Locus Tag PSEBR_a4979
UniParc UPI0002041F0C
UniProtKB Acc F2KLL0
UniProtKB ID F2KLL0_PSEBN
UniRef100 UniRef100_F2KLL0
UniRef50 UniRef50_P37773
UniRef90 UniRef90_Q4K5E8

Product

Feature Type CDS
Coding Frame 1
Product Name
UDP-Nacetylmuramate:l-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
Synonyms
Evidence for Translation
Charge (pH 7) -7.51
Kyte-Doolittle Hydrophobicity Value 0.033
Molecular Weight (kDa) 48321.9
Isoelectric Point (pI) 6.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 577 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001663 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a4979

Human Homologs

References

No references are associated with this feature.