Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5193

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5193
Name
Replicon chromosome
Genomic location 6291552 - 6292028 (+ strand)

Cross-References

RefSeq YP_004356672.1
GI 330812210
Entrez 10474443
INSDC AEA71668.1
NCBI Locus Tag PSEBR_a5193
UniParc UPI0002041307
UniProtKB Acc F2KMC5
UniProtKB ID F2KMC5_PSEBN
UniRef100 UniRef100_F2KMC5
UniRef50 UniRef50_Q4K4S1
UniRef90 UniRef90_Q4K4S1

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor
Synonyms
Evidence for Translation
Charge (pH 7) 2.41
Kyte-Doolittle Hydrophobicity Value -0.192
Molecular Weight (kDa) 18172.8
Isoelectric Point (pI) 8.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 165 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000463 (1847 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5193

Human Homologs

References

No references are associated with this feature.