Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5245

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a5245
Name
Replicon	chromosome
Genomic location	6354685 - 6355863 (+ strand)

Cross-References

RefSeq	YP_004356737.1
GI	330812275
Entrez	10474508
INSDC	AEA71733.1
NCBI Locus Tag	PSEBR_a5245
UniParc	UPI00020415C3
UniProtKB Acc	F2K606
UniProtKB ID	F2K606_PSEBN
UniRef100	UniRef100_A0A0D0R272
UniRef50	UniRef50_G8Q8H8
UniRef90	UniRef90_G8Q2G6

Product

Feature Type	CDS
Coding Frame	1
Product Name	glycine/betaine/L-proline ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	1.04
Kyte-Doolittle Hydrophobicity Value	-0.235
Molecular Weight (kDa)	43.8
Isoelectric Point (pI)	7.43

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004691 (971 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a5245 Search term: glycine/betaine/L-proline ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000301732 ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33] E-value: 5.7e-19 Percent Identity: 31.9
Ensembl 110, assembly GRCh38.p14	ENSP00000371818 ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33] E-value: 5.7e-19 Percent Identity: 31.9

References