Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5286

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a5286
Name
Replicon	chromosome
Genomic location	6402680 - 6404548 (+ strand)

Cross-References

RefSeq	YP_004356786.1
GI	330812324
Entrez	10474557
INSDC	AEA71782.1
NCBI Locus Tag	PSEBR_a5286
UniParc	UPI000204171D
UniProtKB Acc	F2K655
UniProtKB ID	F2K655_PSEBN
UniRef100	UniRef100_A0A0D0R410
UniRef50	UniRef50_Q4K4H4
UniRef90	UniRef90_C3K3H0

Product

Feature Type	CDS
Coding Frame	1
Product Name	ATP-dependent RNA helicase
Synonyms
Evidence for Translation
Charge (pH 7)	27.34
Kyte-Doolittle Hydrophobicity Value	-0.749
Molecular Weight (kDa)	67.6
Isoelectric Point (pI)	10.76

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000419 (525 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a5286 Search term: ATP-dependent RNA helicase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000487062 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000493475 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000493819 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000486516 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000494040 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000486514 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000478443 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000495377 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000496663 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000496524 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000496222 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000486443 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000392494 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000382840 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000486306 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000496052 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000487224 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000486720 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1
Ensembl 110, assembly GRCh38.p14	ENSP00000494518 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 2.8e-68 Percent Identity: 42.1

References