Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5297
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest |
| Locus Tag |
PSEBR_a5297
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 6415874 - 6416788 (+ strand) |
Cross-References
| RefSeq | YP_004356798.1 |
| GI | 330812336 |
| Entrez | 10474569 |
| INSDC | AEA71794.1 |
| NCBI Locus Tag | PSEBR_a5297 |
| UniParc | UPI0002041728 |
| UniProtKB Acc | F2K667 |
| UniProtKB ID | F2K667_PSEBN |
| UniRef100 | UniRef100_A0A0D0R425 |
| UniRef50 | UniRef50_Q4K4G4 |
| UniRef90 | UniRef90_Q4K4G4 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
LysR family transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.91 |
| Kyte-Doolittle Hydrophobicity Value | 0.017 |
| Molecular Weight (kDa) | 34.3 |
| Isoelectric Point (pI) | 5.75 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 449 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000216 (492 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSEBR_a5297
Search term: LysR family transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.