Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5567

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5567
Name
Replicon chromosome
Genomic location 6712142 - 6714079 (+ strand)

Cross-References

RefSeq YP_004357101.1
GI 330812639
Entrez 10474872
INSDC AEA72097.1
NCBI Locus Tag PSEBR_a5567
UniParc UPI0002040BE4
UniProtKB Acc F2K720
UniProtKB ID F2K720_PSEBN
UniRef100 UniRef100_A0A0D0T9V8
UniRef50 UniRef50_Q9I741
UniRef90 UniRef90_G8Q725

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion system, Vgr family
Synonyms
Evidence for Translation
Charge (pH 7) -14.35
Kyte-Doolittle Hydrophobicity Value -0.549
Molecular Weight (kDa) 72.2
Isoelectric Point (pI) 5.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 153 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000090 (3404 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5567

Human Homologs

References

No references are associated with this feature.