Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5628

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5628
Name
Replicon chromosome
Genomic location 6798172 - 6799086 (+ strand)

Cross-References

RefSeq YP_004357171.1
GI 330812709
Entrez 10474942
NCBI Locus Tag PSEBR_a5628

Product

Feature Type CDS
Coding Frame 1
Product Name
GDP-mannose 4,6-dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) 3.38
Kyte-Doolittle Hydrophobicity Value -0.147
Molecular Weight (kDa) 33721.4
Isoelectric Point (pI) 8.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005000 (390 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5628

Human Homologs

Ensembl 97, assembly GRCh38.p12
TDP-glucose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:20324]
E-value: 3.6e-17
Percent Identity: 31.2

References

No references are associated with this feature.