Pseudomonas denitrificans ATCC 13867, H681_00400 (trpA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_00400
Name
trpA
Replicon chromosome
Genomic location 93116 - 93922 (- strand)

Cross-References

RefSeq YP_007655502.1
GI 472323256
EC Number 4.2.1.20
Entrez 14994220
INSDC AGI21962.1
NCBI Locus Tag H681_00400
UniParc UPI0002C4F5EF
UniProtKB Acc M4WTH9
UniProtKB ID M4WTH9_PSEDE
UniRef100 UniRef100_M4WTH9
UniRef50 UniRef50_P07344
UniRef90 UniRef90_M4WTH9

Product

Feature Type CDS
Coding Frame 1
Product Name
tryptophan synthase subunit alpha
Synonyms
Evidence for Translation
Charge (pH 7) -5.62
Kyte-Doolittle Hydrophobicity Value 0.044
Molecular Weight (kDa) 28376.0
Isoelectric Point (pI) 5.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 583 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000035 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_00400
Search term: trpA

Human Homologs

References

No references are associated with this feature.