Pseudomonas denitrificans ATCC 13867, H681_01815

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_01815
Name
Replicon chromosome
Genomic location 395336 - 396709 (+ strand)

Cross-References

RefSeq YP_007655785.1
GI 472323539
Entrez 14994503
INSDC AGI22245.1
NCBI Locus Tag H681_01815
UniParc UPI0002C4EFF5
UniProtKB Acc M4XA58
UniProtKB ID M4XA58_PSEDE
UniRef100 UniRef100_M4XA58
UniRef50 UniRef50_B6INW1
UniRef90 UniRef90_Q02U13

Product

Feature Type CDS
Coding Frame 1
Product Name
cystathionine beta-synthase
Synonyms
Evidence for Translation
Charge (pH 7) -11.66
Kyte-Doolittle Hydrophobicity Value -0.086
Molecular Weight (kDa) 49164.3
Isoelectric Point (pI) 5.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 625 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000390 (377 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_01815

Human Homologs

Ensembl 110, assembly GRCh38.p14
cystathionine beta-synthase [Source:HGNC Symbol;Acc:HGNC:1550]
E-value: 3.9e-67
Percent Identity: 37.1
Ensembl 110, assembly GRCh38.p14
cystathionine beta-synthase [Source:HGNC Symbol;Acc:HGNC:1550]
E-value: 3.9e-67
Percent Identity: 37.1
Ensembl 110, assembly GRCh38.p14
cystathionine beta-synthase [Source:HGNC Symbol;Acc:HGNC:1550]
E-value: 3.9e-67
Percent Identity: 37.1
Ensembl 110, assembly GRCh38.p14
cystathionine beta-synthase [Source:HGNC Symbol;Acc:HGNC:1550]
E-value: 3.9e-67
Percent Identity: 37.1

References

No references are associated with this feature.