Pseudomonas denitrificans ATCC 13867, H681_04480

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_04480
Name
Replicon chromosome
Genomic location 975956 - 976846 (+ strand)

Cross-References

RefSeq YP_007656316.1
GI 472324070
Entrez 14995034
INSDC AGI22776.1
NCBI Locus Tag H681_04480
UniParc UPI0002C4E419
UniProtKB Acc M4WUC4
UniProtKB ID M4WUC4_PSEDE
UniRef100 UniRef100_M4WUC4
UniRef50 UniRef50_B2JTE1
UniRef90 UniRef90_A0A098FZY0

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -4.16
Kyte-Doolittle Hydrophobicity Value -0.061
Molecular Weight (kDa) 32.9
Isoelectric Point (pI) 6.10

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 487 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001088 (834 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_04480

Human Homologs

References

No references are associated with this feature.