Pseudomonas denitrificans ATCC 13867, H681_04760
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest |
| Locus Tag |
H681_04760
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1034581 - 1035540 (+ strand) |
Cross-References
| RefSeq | YP_007656372.1 |
| GI | 472324126 |
| Entrez | 14995090 |
| NCBI Locus Tag | H681_04760 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
pseudouridine synthase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 2.05 |
| Kyte-Doolittle Hydrophobicity Value | -0.201 |
| Molecular Weight (kDa) | 35486.3 |
| Isoelectric Point (pI) | 7.27 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004205 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: H681_04760
Search term: pseudouridine synthase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
RNA pseudouridine synthase D4 [Source:HGNC Symbol;Acc:HGNC:25898]
E-value:
1.1e-12
Percent Identity:
29.8
|
References
No references are associated with this feature.