Strain |
Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest |
Locus Tag |
H681_07725
|
Name |
|
Replicon | chromosome |
Genomic location | 1682044 - 1683048 (+ strand) |
RefSeq | YP_007656961.1 |
GI | 472324715 |
Entrez | 14995679 |
INSDC | AGI23421.1 |
NCBI Locus Tag | H681_07725 |
UniParc | UPI0002C4E1BD |
UniProtKB Acc | M4WW47 |
UniProtKB ID | M4WW47_PSEDE |
UniRef100 | UniRef100_M4WW47 |
UniRef50 | UniRef50_P45684 |
UniRef90 | UniRef90_P45684 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RNA polymerase sigma factor RpoS
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -12.31 |
Kyte-Doolittle Hydrophobicity Value | -0.436 |
Molecular Weight (kDa) | 38230.1 |
Isoelectric Point (pI) | 4.90 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
7VF9 | TRANSCRIPTION | 09/10/21 | Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes | Pseudomonas aeruginosa PAO1 | 4.04 | ELECTRON MICROSCOPY | 94.0 |
7F0R | TRANSCRIPTION/DNA | 06/06/21 | Cryo-EM structure of Pseudomonas aeruginosa SutA transcription activation complex | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SYNTHETIC CONSTRUCT | 5.8 | ELECTRON MICROSCOPY | 94.0 |
7XL4 | TRANSCRIPTION | 04/21/22 | Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes with transcription factor SutA (closed lobe) | Pseudomonas aeruginosa PAO1 | 3.86 | ELECTRON MICROSCOPY | 94.0 |
7XL3 | TRANSCRIPTION | 04/21/22 | Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes with transcription factor SutA (open lobe) | Pseudomonas aeruginosa PAO1 | 3.13 | ELECTRON MICROSCOPY | 94.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002052 (534 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: H681_07725
Search term: RNA polymerase sigma factor RpoS
|