Pseudomonas denitrificans ATCC 13867, H681_08675

Gene Feature Overview

Strain	Pseudomonas denitrificans ATCC 13867 GCF_000349845.1|latest
Locus Tag	H681_08675
Name
Replicon	chromosome
Genomic location	1903569 - 1903901 (- strand)

Cross-References

RefSeq	YP_007657149.1
GI	472324903
Entrez	14995867
INSDC	AGI23609.1
NCBI Locus Tag	H681_08675
UniParc	UPI0002C4EF68
UniProtKB Acc	M4WUY8
UniProtKB ID	M4WUY8_PSEDE
UniRef100	UniRef100_M4WUY8
UniRef50	UniRef50_F8H3I4
UniRef90	UniRef90_W0YXA2

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA binding-protein
Synonyms
Evidence for Translation
Charge (pH 7)	1.19
Kyte-Doolittle Hydrophobicity Value	-0.609
Molecular Weight (kDa)	12636.2
Isoelectric Point (pI)	7.93

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
3QOQ	Transcription/DNA	02/10/11	Crystal Structure of the Transcription Factor AmrZ in Complex with the 18 Base Pair amrZ1 Binding Site	Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT	3.1	X-RAY DIFFRACTION	97.0

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 17 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002243 (527 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H681_08675 Search term: DNA binding-protein

Human Homologs

References