Pseudomonas denitrificans ATCC 13867, H681_12525

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_12525
Name
Replicon chromosome
Genomic location 2793036 - 2794655 (- strand)

Cross-References

RefSeq YP_007657915.1
GI 472325669
Entrez 14996633
INSDC AGI24375.1
NCBI Locus Tag H681_12525
UniParc UPI0002C4EB98
UniProtKB Acc M4XGE8
UniProtKB ID M4XGE8_PSEDE
UniRef100 UniRef100_M4XGE8
UniRef50 UniRef50_M4XGE8
UniRef90 UniRef90_M4XGE8

Product

Feature Type CDS
Coding Frame 1
Product Name
integrase catalytic subunit
Synonyms
Evidence for Translation
Charge (pH 7) 13.23
Kyte-Doolittle Hydrophobicity Value -0.484
Molecular Weight (kDa) 61042.8
Isoelectric Point (pI) 9.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 131 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015019 (71 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_12525

Human Homologs

References

No references are associated with this feature.