Pseudomonas denitrificans ATCC 13867, H681_12545

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_12545
Name
Replicon chromosome
Genomic location 2798642 - 2800060 (- strand)

Cross-References

RefSeq YP_007657919.1
GI 472325673
Entrez 14996637
INSDC AGI24379.1
NCBI Locus Tag H681_12545
UniParc UPI0002C4EEEA
UniProtKB Acc M4WX56
UniProtKB ID M4WX56_PSEDE
UniRef100 UniRef100_M4WX56
UniRef50 UniRef50_A0A077K0M7
UniRef90 UniRef90_M4WX56

Product

Feature Type CDS
Coding Frame 1
Product Name
porin
Synonyms
Evidence for Translation
Charge (pH 7) -3.60
Kyte-Doolittle Hydrophobicity Value -0.353
Molecular Weight (kDa) 51649.3
Isoelectric Point (pI) 6.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 14 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003114 (305 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_12545
Search term: porin

Human Homologs

References

No references are associated with this feature.