Pseudomonas denitrificans ATCC 13867, H681_13740
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest |
| Locus Tag |
H681_13740
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3101209 - 3102804 (+ strand) |
Cross-References
| RefSeq | YP_007658158.1 |
| GI | 472325912 |
| EC Number | 4.1.3.1 |
| Entrez | 14996876 |
| NCBI Locus Tag | H681_13740 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
isocitrate lyase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -6.86 |
| Kyte-Doolittle Hydrophobicity Value | -0.352 |
| Molecular Weight (kDa) | 58763.9 |
| Isoelectric Point (pI) | 6.17 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 6G1O | LYASE | 03/21/18 | Structure of Pseudomonas aeruginosa Isocitrate Lyase, ICL | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 1.882 | X-RAY DIFFRACTION | 93.6 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 275 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002919 (354 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: H681_13740
Search term: isocitrate lyase
|
Human Homologs
References
No references are associated with this feature.