Pseudomonas denitrificans ATCC 13867, H681_13955

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_13955
Name
Replicon chromosome
Genomic location 3150957 - 3152393 (- strand)

Cross-References

RefSeq YP_007658201.1
GI 472325955
EC Number 1.8.1.4
Entrez 14996919
NCBI Locus Tag H681_13955

Product

Feature Type CDS
Coding Frame 1
Product Name
dihydrolipoamide dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -1.22
Kyte-Doolittle Hydrophobicity Value 0.136
Molecular Weight (kDa) 50092.5
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5U8V OXIDOREDUCTASE 12/15/16 Dihydrolipoamide dehydrogenase (LpdG) from Pseudomonas aeruginosa bound to NAD+ Pseudomonas aeruginosa (strain UCBPP-PA14) 1.45 X-RAY DIFFRACTION 97.1
5U8W OXIDOREDUCTASE 12/15/16 Dihydrolipoamide dehydrogenase (LpdG) from Pseudomonas aeruginosa bound to NADH Pseudomonas aeruginosa (strain UCBPP-PA14) 1.79 X-RAY DIFFRACTION 97.1
1LPF OXIDOREDUCTASE 10/26/92 THREE-DIMENSIONAL STRUCTURE OF LIPOAMIDE DEHYDROGENASE FROM PSEUDOMONAS FLUORESCENS AT 2.8 ANGSTROMS RESOLUTION. ANALYSIS OF REDOX AND THERMOSTABILITY PROPERTIES Pseudomonas fluorescens 2.8 X-RAY DIFFRACTION 96.9
5U8U OXIDOREDUCTASE 12/15/16 Dihydrolipoamide dehydrogenase (LpdG) from Pseudomonas aeruginosa Pseudomonas aeruginosa (strain UCBPP-PA14) 1.35 X-RAY DIFFRACTION 97.1

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 651 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003776 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_13955

Human Homologs

Ensembl 110, assembly GRCh38.p14
dihydrolipoamide dehydrogenase [Source:HGNC Symbol;Acc:HGNC:2898]
E-value: 8.8e-123
Percent Identity: 50.6
Ensembl 110, assembly GRCh38.p14
dihydrolipoamide dehydrogenase [Source:HGNC Symbol;Acc:HGNC:2898]
E-value: 8.8e-123
Percent Identity: 50.6

References

No references are associated with this feature.