Pseudomonas denitrificans ATCC 13867, H681_16220

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_16220
Name
Replicon chromosome
Genomic location 3660745 - 3661446 (- strand)

Cross-References

RefSeq YP_007658652.1
GI 472326406
Entrez 14997370
INSDC AGI25112.1
NCBI Locus Tag H681_16220
UniParc UPI0002C4F787
UniProtKB Acc M4X252
UniProtKB ID M4X252_PSEDE
UniRef100 UniRef100_M4X252
UniRef50 UniRef50_Q9HZJ9
UniRef90 UniRef90_A0A024HKT8

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 7.69
Kyte-Doolittle Hydrophobicity Value 0.061
Molecular Weight (kDa) 25661.7
Isoelectric Point (pI) 10.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2FBQ TRANSCRIPTION 12/09/05 The crystal structure of transcriptional regulator PA3006 Pseudomonas aeruginosa 1.8 X-RAY DIFFRACTION 91.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 288 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002576 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_16220

Human Homologs

References

No references are associated with this feature.