Pseudomonas denitrificans ATCC 13867, H681_17810 (ruvA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_17810
Name
ruvA
Replicon chromosome
Genomic location 4012209 - 4012814 (- strand)

Cross-References

RefSeq YP_007658969.1
GI 472326723
Entrez 14997687
INSDC AGI25429.1
NCBI Locus Tag H681_17810
UniParc UPI0002C4DBDB
UniProtKB Acc M4X035
UniProtKB ID M4X035_PSEDE
UniRef100 UniRef100_M4X035
UniRef50 UniRef50_A6VA06
UniRef90 UniRef90_A6VA06

Product

Feature Type CDS
Coding Frame 1
Product Name
Holliday junction DNA helicase RuvA
Synonyms
Evidence for Translation
Charge (pH 7) -1.07
Kyte-Doolittle Hydrophobicity Value 0.057
Molecular Weight (kDa) 22008.5
Isoelectric Point (pI) 6.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
7X7Q RECOMBINATION/DNA 03/10/22 CryoEM structure of RuvA-RuvB-Holliday junction complex Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT 7.02 ELECTRON MICROSCOPY 92.0
7X5A DNA BINDING PROTEIN/DNA 03/04/22 CryoEM structure of RuvA-Holliday junction complex Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT 3.01 ELECTRON MICROSCOPY 98.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 580 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000931 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_17810
Search term: ruvA

Human Homologs

References

No references are associated with this feature.