Pseudomonas denitrificans ATCC 13867, H681_18685
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest |
| Locus Tag |
H681_18685
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4188845 - 4190218 (- strand) |
Cross-References
| RefSeq | YP_007659144.1 |
| GI | 472326898 |
| Entrez | 14997862 |
| NCBI Locus Tag | H681_18685 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
signal recognition particle protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 12.23 |
| Kyte-Doolittle Hydrophobicity Value | -0.186 |
| Molecular Weight (kDa) | 49494.5 |
| Isoelectric Point (pI) | 10.22 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 664 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001936 (537 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: H681_18685
Search term: signal recognition particle protein
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value:
8.7e-43
Percent Identity:
30.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value:
8.7e-43
Percent Identity:
30.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value:
8.7e-43
Percent Identity:
30.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value:
8.7e-43
Percent Identity:
30.1
|
References
No references are associated with this feature.