Pseudomonas aeruginosa LESB58, PALES_03981

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest
Locus Tag
PALES_03981
Name
Replicon chromosome
Genomic location 435749 - 436933 (+ strand)

Cross-References

RefSeq YP_002438006
GI 218889142
Entrez 7175451

Product

Feature Type CDS
Coding Frame 1
Product Name
putative cystathionine gamma-lyase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) -2.75
Kyte-Doolittle Hydrophobicity Value -0.053
Molecular Weight (kDa) 42.8
Isoelectric Point (pI) 6.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
7BA4 CYTOSOLIC PROTEIN 12/15/20 Structure of Cystathionine gamma-lyase from Pseudomonas aeruginosa Pseudomonas aeruginosa 2 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 567 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000391 (846 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PALES_03981

Human Homologs

Ensembl 110, assembly GRCh38.p14
cystathionine gamma-lyase [Source:HGNC Symbol;Acc:HGNC:2501]
E-value: 6.4e-103
Percent Identity: 52.2

References

No references are associated with this feature.