Pseudomonas aeruginosa LESB58, PALES_06331 (speD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest |
| Locus Tag |
PALES_06331
|
| Name |
speD
|
| Replicon | chromosome |
| Genomic location | 684942 - 685736 (+ strand) |
Cross-References
| RefSeq | YP_002438241 |
| GI | 218889377 |
| Entrez | 7175614 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
S-adenosylmethionine decarboxylase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -18.65 |
| Kyte-Doolittle Hydrophobicity Value | -0.382 |
| Molecular Weight (kDa) | 30.4 |
| Isoelectric Point (pI) | 4.48 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 78 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000633 (395 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PALES_06331
Search term: speD
Search term: S-adenosylmethionine decarboxylase
|
Human Homologs
References
No references are associated with this feature.