Pseudomonas aeruginosa LESB58, PALES_07141 (phzD1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest
Locus Tag
PALES_07141
Name
phzD1
Replicon chromosome
Genomic location 776420 - 777043 (- strand)

Cross-References

RefSeq YP_002438322
GI 218889458
Entrez 7180622

Product

Feature Type CDS
Coding Frame 1
Product Name
phenazine biosynthesis protein PhzD
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) -3.89
Kyte-Doolittle Hydrophobicity Value -0.090
Molecular Weight (kDa) 23.2
Isoelectric Point (pI) 5.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1NF9 HYDROLASE 12/13/02 Crystal Structure of PhzD protein from Pseudomonas aeruginosa Pseudomonas aeruginosa 1.5 X-RAY DIFFRACTION 99.5
1NF8 HYDROLASE 12/13/02 Crystal structure of PhzD protein active site mutant with substrate Pseudomonas aeruginosa 1.6 X-RAY DIFFRACTION 99.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 233 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001494 (1079 members)
Putative Inparalogs 1 predicted inparalogs
phenazine biosynthesis protein PhzD (PALES_34221) 100.0% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PALES_07141
Search term: phzD1

Human Homologs

References

No references are associated with this feature.