Pseudomonas aeruginosa LESB58, PALES_15121
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest |
| Locus Tag |
PALES_15121
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1642445 - 1643920 (+ strand) |
Cross-References
| RefSeq | YP_002439116 |
| GI | 218890252 |
| Entrez | 7176236 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative outer membrane protein precursor
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -6.33 |
| Kyte-Doolittle Hydrophobicity Value | -0.164 |
| Molecular Weight (kDa) | 52.8 |
| Isoelectric Point (pI) | 5.22 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AMR gene predictions from CARD database
Identified using the Resistance Gene Identifier (RGI)
| Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
| opmE | opmE is an outer membrane factor protein that is part of the multidrug efflux pump MexPQ-OpmE. [PMID:16301811] | ARO:3003700 | protein homolog model | Strict | 916.8 | 99.19 | 3.2.5 |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 284 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002143 (311 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PALES_15121
Search term: putative outer membrane protein precursor
|
Human Homologs
References
No references are associated with this feature.