Pseudomonas aeruginosa LESB58, PALES_21161
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest |
| Locus Tag |
PALES_21161
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2287639 - 2288067 (- strand) |
Cross-References
| RefSeq | YP_002439719 |
| GI | 218890855 |
| Entrez | 7179755 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative cobalamin biosynthesis protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.14 |
| Kyte-Doolittle Hydrophobicity Value | 0.043 |
| Molecular Weight (kDa) | 15.1 |
| Isoelectric Point (pI) | 6.93 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 2W6K | BIOSYNTHETIC PROTEIN | 12/18/08 | The crystal structure at 1.7 A resolution of CobE, a protein from the cobalamin (vitamin B12) biosynthetic pathway | PSEUDOMONAS AERUGINOSA | 1.7 | X-RAY DIFFRACTION | 99.3 |
| 2W6L | BIOSYNTHETIC PROTEIN | 12/18/08 | The crystal structure at 1.7 A resolution of CobE, a protein from the cobalamin (vitamin B12) biosynthetic pathway | PSEUDOMONAS AERUGINOSA | 1.89 | X-RAY DIFFRACTION | 98.6 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 130 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002633 (409 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PALES_21161
Search term: putative cobalamin biosynthesis protein
|
Human Homologs
References
No references are associated with this feature.