Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4544
|
Name |
rluD
Synonym: yfiI |
Replicon | chromosome |
Genomic location | 5090853 - 5091815 (- strand) |
Transposon Mutants | 4 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_253234.1 |
GI | 15599740 |
Affymetrix | PA4544_rluD_at |
DNASU | PaCD00007967 |
Entrez | 877896 |
GenBank | AAG07932.1 |
INSDC | CAA78140.1 |
NCBI Locus Tag | PA4544 |
protein_id(GenBank) | gb|AAG07932.1|AE004868_3|gnl|PseudoCAP|PA4544 |
TIGR | NTL03PA04545 |
UniParc | UPI0000134295 |
UniProtKB Acc | P33640 |
UniProtKB ID | RLUD_PSEAE |
UniRef100 | UniRef100_P33640 |
UniRef50 | UniRef50_P33640 |
UniRef90 | UniRef90_P33640 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
pseudouridine synthase
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 2.09 |
Kyte-Doolittle Hydrophobicity Value | -0.121 |
Molecular Weight (kDa) | 35.6 |
Isoelectric Point (pI) | 7.36 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004205 (535 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4544
Search term: rluD
Search term: pseudouridine synthase
|
Ensembl
110, assembly
GRCh38.p14
|
RNA pseudouridine synthase D4 [Source:HGNC Symbol;Acc:HGNC:25898]
E-value:
3.5e-14
Percent Identity:
30.1
|
A pseudouridine synthase required for the formation of two universally conserved pseudouridines in ribosomal RNA is essential for normal growth of Escherichia coli.
Raychaudhuri S, Conrad J, Hall BG, Ofengand J
RNA 1998 Nov;4(11):1407-17
PubMed ID: 9814761
|