Pseudomonas aeruginosa PAO1, PA4957 (psd)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA4957
Name
psd
Replicon chromosome
Genomic location 5562418 - 5563287 (+ strand)

Cross-References

RefSeq NP_253644.1
GI 15600150
Affymetrix PA4957_psd_at
DNASU PaCD00008143
Entrez 879173
GenBank AAG08342.1
INSDC AAG08342.1
NCBI Locus Tag PA4957
protein_id(GenBank) gb|AAG08342.1|AE004908_8|gnl|PseudoCAP|PA4957
TIGR NTL03PA04958
UniParc UPI00000C5E94
UniProtKB Acc Q9HUK8
UniProtKB ID PSD_PSEAE
UniRef100 UniRef100_Q9HUK8
UniRef50 UniRef50_P43789
UniRef90 UniRef90_Q9HUK8

Product

Feature Type CDS
Coding Frame 1
Product Name
phosphatidylserine decarboxylase
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected using LC-MS/MS (32.00 kDa, PMID:21751344)
Charge (pH 7) 2.53
Kyte-Doolittle Hydrophobicity Value 0.018
Molecular Weight (kDa) 32.0
Isoelectric Point (pI) 7.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Outer Membrane Vesicle Class 1
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 227 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004572 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4957
Search term: psd

Human Homologs

References

Structural characterization of Escherichia coli phosphatidylserine decarboxylase.
Li QX, Dowhan W
J Biol Chem 1988 Aug 15;263(23):11516-22
PubMed ID: 3042771
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344