Motif View

Internal ID 17654577
Source Database TransTermHP TERM 33
Feature Type terminator
Name
Rho-independent transcription terminator TERM 33
Sequence CGCCCCGGGCCGCCCCGCGGGGCGGCCCGGATCG
Look for more occurrences
Start 213561
End 213594
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGCGCGCGTGAAGA(5' tail) CGATCCGGGCCGCCC(5' stem) CGCG(loop) GGGCGGCCCGGGGCG(3' stem) TCACCAGATCGAGCG(3' tail). Confidence: 95.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685