Motif View

Internal ID 17655797
Source Database TransTermHP TERM 310
Feature Type terminator
Name
Rho-independent transcription terminator TERM 310
Sequence CCCGGCGCCATGGCGCCGGG
Look for more occurrences
Start 1231213
End 1231232
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCGCAAACGAAAAA(5' tail) CCCGGCGC(5' stem) CATG(loop) GCGCCGGG(3' stem) TTCCCTTTCAGCCTG(3' tail). Confidence: 100. opp_overlap 1231213 1231208

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685