Motif View

Internal ID 17656314
Source Database TransTermHP TERM 1132
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1132
Sequence GGAGGCTTCGGCCTCC
Look for more occurrences
Start 4930713
End 4930728
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCGAGACGAAAAAAA(5' tail) GGAGGC(5' stem) CGAA(loop) GCCTCC(3' stem) TTTTTTCTTCATTCC(3' tail). Confidence: 100. opp_overlap 4930713 4930706

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685