| Internal ID | 17657397 | Source Database | TransTermHP TERM 1287 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1287
|
| Sequence |
CTATGACACGCACGATCTGACCCGGGGCGGGCAGATGGCGCGTGTCATGG Look for more occurrences |
| Start | 5469084 |
| End | 5469133 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AGGGTTTGACAAGAC(5' tail) CTATGACACGCACGATCTGACCCG(5' stem) GGG(loop) CGGG-CAGATGGCGCGTGTCATGG(3' stem) TGATTGGTCGACCCG(3' tail). Confidence: 91. gap 1, opp_overlap 5469083 5469081 5469084, overlap 5469082 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|