Motif View

Internal ID 17657455
Source Database TransTermHP TERM 1356
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1356
Sequence GGCGGTGCCGTGCGAACGGGACCGCC
Look for more occurrences
Start 5644280
End 5644305
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CACCGGCAAAAAAAA(5' tail) GGCGGTCCCGT(5' stem) TCGC(loop) ACGGCACCGCC(3' stem) CAAGTCACGGAGTTG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685